tblLAB_RNA - Laboratory values
holds date, value, detection limit and type of viral assay.
Core Fields
Note: Fields marked bold form the unique identifier for a record of the table.
| Field name |
Format |
Description |
| PATIENT
|
character (or numeric if possible) |
Code to identify patient (Cohort Patient ID) |
| RNA_D
|
yyyy-mm-dd |
Date of Measurement/Sample |
| RNA_D_A
|
character: see coding of date precision |
Precision annotation variable for date of measurement |
| RNA_V
|
numeric: -1 = undetectable or detection limit as negative value |
HIV-RNA measurement value |
| RNA_L
|
numeric |
Lower Limit of HIV-RNA Assay |
| RNA_T
|
numeric. see coding table for valid codings. |
IF AVAILABLE, What type of VIRAL ASSAY was used for this measurement? |
Additional Fields
| Field name |
Format |
Description |
| RNA_UL
|
numeric |
IF AVAILABLE, Upper Limit of assay |
QA Checks
| Table |
Crosstable |
Error Code |
Description |
Study specific |
Is HICDEP |
| AllTables |
CrossTable |
ATC001 |
any date in database after DEATH_D in tblLTFU |
|
Yes |
| AllTables |
CrossTable |
ATC002 |
any date in database after DROP_D in tblLTFU |
|
Yes |
| AllTables |
CrossTable |
ATC003 |
any date in database before BIRTH_D in tblBAS |
|
Yes |
| AllTables |
CrossTable |
ATC004 |
any date in database in the future |
|
Yes |
| AllTables |
CrossTable |
ATC005 |
patients submitted previously who have been missed out |
|
Yes |
| AllTables |
CrossTable |
ATC006 |
Any fields not coded as coding lists on table definition |
|
Yes |
| tblLAB_RNA |
WithinTable |
RW001 |
Duplicate records for same RNA_D |
|
Yes |
| tblLAB_RNA |
WithinTable |
RW002 |
RNA_V < 0 and RNA_L missing |
|
Yes |
| tblLAB_RNA |
WithinTable |
RW003 |
RNA_V > 10 000 and (RNA_V modulo 1000) = 1 and RNA_UL missing |
|
Yes |
| tblLAB_RNA |
WithinTable |
RW004 |
Missing RNA_D |
|
Yes |
| tblLAB_RNA |
WithinTable |
RW005 |
Missing RNA_V |
|
Yes |
| tblLAB_RNA |
WithinTable |
RW006 |
RNA_V > 10 million |
|
Yes |
| tblLAB_RNA |
WithinTable |
RW007 |
RNA_V < RNA_L and RNA_V >= 0 |
|
Yes |
| tblLAB_RNA |
WithinTable |
RW008 |
RNA_V > RNA_UL |
|
Yes |
| tblLAB_RNA |
CrossTable |
RC001 |
Patient has no record in BAS |
|
Yes |