tblLAB_HCV - Information on <b>H</b>epatitis <b>C</b> <b>V</b>irus genotype and subtype

holds information on HCV genotype and subtype

Core Fields

Field name Format Description
PATIENT Numeric Code to identify patient (Cohort Patient ID)
SAMPLE_D Date (yyyy-mm-dd) Date of the actual sample taken (NOT the test date)
GENOTYPE

numeric:

  • 1
  • 2
  • 3
  • 4
  • 5
  • 6
HCV-genotype

Please supply a row for each combination of Genotype and Subtype, e.g.:
9999999 01-01-1901 1 a
9999999 01-01-1901 1 b
(the genotype and subtype should be submitted in separate columns)
SUBTYPE

Character:

  • a
  • b
  • c
  • d
  • e
  • f
  • g
  • h
  • i
  • j
HCV-subtype
If unknown leave blank

Additional Fields

Field name Format Description
VIROTYPE

numeric:

  • 2 = HCV
Type of Virus

QA Checks

Table Crosstable Error Code Description Study specific Is HICDEP
AllTables CrossTable ATC001 any date in database after DEATH_D in tblLTFU Yes
AllTables CrossTable ATC002 any date in database after DROP_D in tblLTFU Yes
AllTables CrossTable ATC003 any date in database before BIRTH_D in tblBAS Yes
AllTables CrossTable ATC004 any date in database in the future Yes
AllTables CrossTable ATC005 patients submitted previously who have been missed out Yes
AllTables CrossTable ATC006 Any fields not coded as coding lists on table definition Yes